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Cytoscape
Research tool for view and analyze molecular interactions networks....
SLiMScape for Cytoscape
A protein motif analysis plugin for Cytoscape...
PEANuT for Cytoscape
A Cytoscape plugin for pathway enrichment analysis...
venn cytoscape plugin
Cytoscape plugin for Venn and Euler diagrams...
FunMod Network Analysis for Cytoscape
An easy-to-use plugin that perfectly integrates within Cytoscape...
CyClus3D
A Cytoscape plugin for identifying functional modules...
plugin identify functional well-functional Cytoscape notation
net2text
Performs simulations for transcription regulation networks in Cytoscape...
export simulation Cytoscape gather simulation information Cytoscape add-in
CyFluxViz
View flux distributions with the help of this plugin...
CytoCopteR
Cytoscape plugin to help you with your work...
NetCirChro
Cytoscape plugin for network visualization on circular chromosomes....
plugin visualization plugin circular panoramic video Circular pattern circular
CySBML
CySBML is a Cytoscape plugin for the import and work with SBML files in Cytoscape providing the visualisation of SBML network annotations within the network context....
ExprEssence
Highlight network links with this Cytoscape plugin...