simuPOP

simuPOP is a general-purpose individual-based forward-time population genetics simulation environment. The core of simuPOP is a scripting language (Python) that provides a large number of objects and
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simuPOP Ranking & Summary

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  • Rating:
  • License:
  • GPL
  • Publisher Name:
  • Bo Peng
  • Publisher web site:
  • Operating Systems:
  • Windows NT / 2K / XP / Vista / 7
  • File Size:
  • 6.6 MB

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simuPOP Description

A general-purpose individual-based forward-time population genetics simulation environment simuPOP is a general-purpose individual-based forward-time population genetics simulation environment. The core of simuPOP is a scripting language (Python) that provides a large number of objects and functions to manipulate populations, and a mechanism to evolve populations forward in time. Using this R/Splus-like environment, users can create, manipulate and evolve populations interactively, or write a script and run it as a batch file. Owing to its flexible and extensible design, simuPOP can simulate large and complex evolutionary processes with ease. At a more user-friendly level, simuPOP provides an increasing number of built-in scripts that perform simulations ranging from implementation of basic population genetics models to generating datasets under complex evolutionary scenarios.


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