Genes2Networks

Genes2Networks - command-line tool to place lists of mammalian genes in the context of mammalian signalome and interactome
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Genes2Networks Ranking & Summary

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  • Rating:
  • License:
  • Free
  • Price:
  • Free
  • Publisher Name:
  • By Mount Sinai School of Medicine Ma'ayan
  • Operating Systems:
  • Windows 95, Windows Vista, Windows 98, Windows Me, Windows, Windows XP, Windows NT, Windows 2000, Windows 3.x
  • Additional Requirements:
  • DOS, Windows 3.x/95/98/Me/NT/2000/XP/2003 Server/Vista
  • File Size:
  • 9.19MB
  • Total Downloads:
  • 731

Genes2Networks Tags


Genes2Networks Description

Genes2Networks is a command-line software tool that places lists of mammalian genes in the context of a background mammalian signalome and interactome networks. The input to the program is a list of human Entrez Gene gene symbols and background networks in SIG format, while the output includes: (a) all identified interactions for the genes/proteins (b) a subnetwork connecting the genes/proteins using intermediate components that are used to connect the genes (c) ranking of the specificity of intermediate components to interact with the list of genes/proteins (d) a clustering analysis of the genes/proteins from the seed list based on their distance from one another in network space.


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