CoNet Find relationships between repeatedly observed items with this plugin
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search Relationship Finder occurrence Cytoscape Plugin

CoNet Description

Specially built as a Cytoscape plugin, CoNet is able to detect significant non-random patterns of co-occurrence. CoNet can find both copresence and mutual exclusion patterns in incidence and abundance data. Although it was designed with ecological data in mind, CoNet can be applied in general to infer relationships between objects observed in different samples. Main features: large choice of correlation, distance and similarity measures significance can be tested with various randomization routines and multiple testing corrections repeatable data analysis with settings loading and saving command line tool for the analysis of large data sets several data preprocessing and filtering options

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