CHSMiner Detect CHSs with this tool.
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CHSMiner Description

CHSMiner is a small, Java based application specially designed to offer you an integrated GUI environment to help you with the detection, evaluation and visualization of chromosomal homologous segments (CHSs). Main features: Define CHSs based on shared gene content alone to fully explore potential homology. Uniform design for both syntenies (between two different genomes) and paralogons (within the same genome). Fast greedy algorithm to search for CHSs and formal statistical evaluation of the results. Interactive visualization of CHSs from an individual one to whole genome pattern. Entire Java package and convenient windows interface for end users.

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