BioCAT

A biological image classification and annotation utility
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BioCAT Ranking & Summary

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  • Rating:
  • License:
  • GPL
  • Publisher Name:
  • BioCAT Team
  • Publisher web site:
  • http://code.google.com/u/114627521973333297188/
  • Operating Systems:
  • Mac OS X
  • File Size:
  • 21.2 MB

BioCAT Tags


BioCAT Description

BioCat is a free and open-source annotation tool for multi-dimensional biological images. BioCAT supports training/testing and cross validation modes for selecting model. You can also use training only mode.For each of these methods, there are two modes - Simple mode and Comparison mode. In Simple mode, the user can select a single algorithm for feature extractor, feature selector and classifier. Then the selected algorithms will be applied and a model created.In Comparison mode, the user can create multiple chains of algorithms and run the selected chains. The best chain identified for a given problem will be selected.For image classification and annotation, there are two modes - Image Annotaton and ROI( Region of Interest) Annotation. Both these modes can be used by loading saved model or by using the model in memory.


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