Bio::Ontology::GOterm

Bio::Ontology::GOterm is a representation of GO terms.
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Bio::Ontology::GOterm Ranking & Summary

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  • Rating:
  • License:
  • Perl Artistic License
  • Price:
  • FREE
  • Publisher Name:
  • Christian M. Zmasek
  • Publisher web site:
  • http://search.cpan.org/~birney/bioperl-1.4/Bio/Ontology/Relationship.pm

Bio::Ontology::GOterm Tags


Bio::Ontology::GOterm Description

Bio::Ontology::GOterm is a representation of GO terms. Bio::Ontology::GOterm is a representation of GO terms.SYNOPSIS $term = Bio::Ontology::GOterm->new ( -go_id => "GO:0016847", -name => "1-aminocyclopropane-1-carboxylate synthase", -definition => "Catalysis of ...", -is_obsolete => 0, -comment => "" ); $term->add_definition_references( @refs ); $term->add_secondary_GO_ids( @ids ); $term->add_aliases( @aliases ); foreach my $dr ( $term->each_definition_reference() ) { print $dr, "n"; } # etc.This is "dumb" class for GO terms (it provides no functionality related to graphs). Implements Bio::Ontology::TermI. Requirements: · Perl


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